STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_2302Sucrose-6-phosphate hydrolase; Belongs to the glycosyl hydrolase 32 family. (484 aa)    
Predicted Functional Partners:
CHK_0797
Alpha-galactosidase.
  
  
 0.791
CHK_2186
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
 
 0.753
CHK_0256
Neopullulanase.
  
 
 0.748
CHK_1812
Ascorbate-specific PTS system, EIIA component.
    
 0.722
CHK_0294
Putative sugar kinase, PfkB family protein.
 
 
 0.659
CHK_2723
Mannitol-1-phosphate 5-dehydrogenase.
  
  
 0.659
CHK_0367
Fructokinase.
 
 
 0.646
CHK_2273
Xylose isomerase.
  
  
 0.623
CHK_1916
Hexokinase.
   
 
 0.602
CHK_0226
Putative sugar kinase, PfkB family protein.
  
 
 0.594
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.