STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_2657Hypothetical protein. (203 aa)    
Predicted Functional Partners:
CHK_2656
Hypothetical protein.
 
  
 0.979
CHK_1961
Flagellar motor switch protein FliN.
    
 
 0.884
CHK_2658
SAM-dependent methyltransferase.
       0.773
CHK_0695
Phage putative head morphogenesis protein, SPP1 gp7 family.
  
     0.647
CHK_3112
Hypothetical protein.
 
     0.602
CHK_2659
Putative arylsulfatase regulatory protein.
       0.551
CHK_0707
Phage tail length tape-measure protein.
  
     0.488
CHK_2348
Hypothetical protein.
  
     0.485
CHK_0021
Putative internalin.
  
     0.449
CHK_0460
Hypothetical protein.
 
     0.442
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.