STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_2704Sensor histidine kinase. (594 aa)    
Predicted Functional Partners:
CHK_0547
Sensory box histidine kinase/response regulator.
     
 0.799
CHK_0633
Two-component response regulator.
 
  
  0.751
CHK_2703
Two-component response regulator.
 
  
  0.750
CHK_1002
Osmosensitive K+ channel histidine kinase KdpD.
   
 
 0.745
CHK_1004
Sensory box histidine kinase/response regulator.
   
 
 0.745
CHK_2229
Two-component response regulator.
 
  
  0.727
CHK_0972
Two-component system response regulator.
 
  
  0.715
CHK_1824
Two-component system response regulator protein.
 
  
  0.701
CHK_2592
Two-component response regulator.
 
  
  0.698
CHK_0029
Two component transcriptional regulator, LytTR family.
 
  
  0.693
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.