STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_2829Xylulose kinase; Belongs to the FGGY kinase family. (496 aa)    
Predicted Functional Partners:
CHK_2830
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
       0.714
CHK_2831
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
       0.714
CHK_2828
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
    0.656
rhaA
L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
  
 
 0.627
CHK_2827
Acetoin dehydrogenase E1 component beta-subunit.
       0.586
CHK_2273
Xylose isomerase.
  
 
 0.584
CHK_0561
Serine/threonine protein kinase.
  
  
 0.546
CHK_2839
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.534
CHK_2977
Ribulose-phosphate 3-epimerase.
 
  
 0.534
CHK_2825
Ribulose-1,5-bisphosphate carboxylase, Type III; Belongs to the RuBisCO large chain family.
  
    0.512
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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