STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_2923Hypothetical protein. (589 aa)    
Predicted Functional Partners:
CHK_2922
Multiple sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
CHK_0460
Hypothetical protein.
  
 0.761
CHK_1362
Arylesterase.
  
 0.761
CHK_2920
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF.
  
  
 0.750
CHK_2921
Maltose/maltodextrin ABC transporter, permease protein MalG.
  
    0.747
CHK_2186
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.659
CHK_0487
Putative surface protein, responsible for cell interaction; Contains cell adhesion domain and ChW-repeats.
  
 
 0.649
CHK_2924
Hypothetical protein.
       0.620
CHK_3096
Hypothetical protein.
 
  
 0.596
CHK_2917
Extracellular solute-binding protein, family 1.
 
  
 0.595
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.