STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfAATPase component of general energizing module of ECF transporter; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (279 aa)    
Predicted Functional Partners:
CHK_2961
Transmembrane component of general energizing module of ECF transporter.
 0.998
CHK_0062
Substrate-specific component BioY of biotin ECF transporter.
 
 
 0.953
CHK_1456
ABC transporter, ATP-binding protein.
 
 
 
0.930
CHK_1792
Transmembrane component.
  
 0.923
CHK_1872
Transmembrane component.
  
 0.923
CHK_2439
Transmembrane component.
  
 0.923
CHK_0306
Lipid A export ATP-binding/permease protein MsbA.
 
   
 
0.913
CHK_1179
Lipid A export ATP-binding/permease protein MsbA.
 
   
 
0.913
CHK_2437
Transporter.
 
   
 
0.913
CHK_2062
ABC-type multidrug/protein/lipid transport system, ATPase component.
 
   
 
0.912
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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