STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_2999Flavodoxin. (160 aa)    
Predicted Functional Partners:
CHK_3000
Hypothetical protein; Belongs to the 4-oxalocrotonate tautomerase family.
   
   0.757
CHK_1308
Pyruvate-flavodoxin oxidoreductase.
     
 0.681
CHK_0912
Oxidoreductase, aldo/keto reductase family.
     0.623
CHK_2169
Oxidoreductase of aldo/keto reductase family, subgroup 1.
     0.542
CHK_2998
Hypothetical protein.
       0.491
CHK_2036
Oxidoreductase of aldo/keto reductase family, subgroup 1.
     0.470
CHK_0394
Nitrite reductase probable electron transfer 4Fe-S subunit.
     
 0.458
CHK_1195
Iron-sulfur flavoprotein.
 
 
  0.435
CHK_0010
Iron-sulfur flavoprotein.
 
  
  0.429
CHK_2222
Iron-sulfur flavoprotein.
 
  
  0.420
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.