Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHK_0410 | CHK_1916 | CHK_0410 | CHK_1916 | Transaldolase. | Hexokinase. | 0.883 |
CHK_0410 | CHK_2247 | CHK_0410 | CHK_2247 | Transaldolase. | Ribose 5-phosphate isomerase B. | 0.512 |
CHK_0410 | CHK_2273 | CHK_0410 | CHK_2273 | Transaldolase. | Xylose isomerase. | 0.426 |
CHK_0410 | CHK_3027 | CHK_0410 | CHK_3027 | Transaldolase. | ROK family Glucokinase with ambiguous substrate specificity. | 0.711 |
CHK_0410 | pgi | CHK_0410 | CHK_0263 | Transaldolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.973 |
CHK_0445 | CHK_1916 | CHK_0445 | CHK_1916 | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. | Hexokinase. | 0.865 |
CHK_0445 | CHK_2247 | CHK_0445 | CHK_2247 | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. | Ribose 5-phosphate isomerase B. | 0.435 |
CHK_0445 | CHK_3027 | CHK_0445 | CHK_3027 | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. | ROK family Glucokinase with ambiguous substrate specificity. | 0.710 |
CHK_0445 | pgi | CHK_0445 | CHK_0263 | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.448 |
CHK_1916 | CHK_0410 | CHK_1916 | CHK_0410 | Hexokinase. | Transaldolase. | 0.883 |
CHK_1916 | CHK_0445 | CHK_1916 | CHK_0445 | Hexokinase. | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. | 0.865 |
CHK_1916 | CHK_2247 | CHK_1916 | CHK_2247 | Hexokinase. | Ribose 5-phosphate isomerase B. | 0.618 |
CHK_1916 | CHK_2273 | CHK_1916 | CHK_2273 | Hexokinase. | Xylose isomerase. | 0.842 |
CHK_1916 | CHK_2475 | CHK_1916 | CHK_2475 | Hexokinase. | Mannose-6-phosphate isomerase. | 0.629 |
CHK_1916 | CHK_3027 | CHK_1916 | CHK_3027 | Hexokinase. | ROK family Glucokinase with ambiguous substrate specificity. | 0.707 |
CHK_1916 | pgi | CHK_1916 | CHK_0263 | Hexokinase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.905 |
CHK_2247 | CHK_0410 | CHK_2247 | CHK_0410 | Ribose 5-phosphate isomerase B. | Transaldolase. | 0.512 |
CHK_2247 | CHK_0445 | CHK_2247 | CHK_0445 | Ribose 5-phosphate isomerase B. | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. | 0.435 |
CHK_2247 | CHK_1916 | CHK_2247 | CHK_1916 | Ribose 5-phosphate isomerase B. | Hexokinase. | 0.618 |
CHK_2247 | CHK_2273 | CHK_2247 | CHK_2273 | Ribose 5-phosphate isomerase B. | Xylose isomerase. | 0.433 |
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