Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CHK_3205Transcriptional regulatory protein CitB, DpiA. (208 aa)    
Predicted Functional Partners:
CHK_1002
Osmosensitive K+ channel histidine kinase KdpD.
    
 0.895
CHK_1004
Sensory box histidine kinase/response regulator.
    
 0.895
CHK_0547
Sensory box histidine kinase/response regulator.
    
 0.878
CHK_1961
Flagellar motor switch protein FliN.
   
 
  0.817
CHK_1975
Chemotaxis protein CheV.
     
 0.764
CHK_0791
Sensor histidine kinase.
 
 0.736
CHK_1681
Sensory box histidine kinase/response regulator.
    
 0.701
CHK_2157
Sensory box histidine kinase/response regulator.
    
 0.701
CHK_0634
Sensor histidine kinase.
  
 0.604
CHK_0973
Sensor histidine kinase.
  
 0.604
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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