STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_3207Alcohol dehydrogenase. (370 aa)    
Predicted Functional Partners:
CHK_2745
Acetaldehyde dehydrogenase.
 0.955
CHK_3201
Acetaldehyde dehydrogenase.
 0.955
CHK_1308
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.946
CHK_1864
Acetaldehyde dehydrogenase.
 0.924
CHK_3033
CoA-acylating propionaldehyde dehydrogenase.
 0.877
CHK_3208
4-hydroxybutyrate:acetyl-CoA CoA transferase.
  
 
 0.877
CHK_3209
4-hydroxybutyrate:acetyl-CoA CoA transferase.
  
 
 0.820
rnfB
Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 
 0.720
CHK_1075
NAD-reducing hydrogenase subunit HoxF.
  
 
 0.716
CHK_3211
4-hydroxybutanoyl-CoA dehydratase; Vinylacetyl-CoA Delta-isomerase.
 
   
 0.710
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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