STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_32094-hydroxybutyrate:acetyl-CoA CoA transferase. (89 aa)    
Predicted Functional Partners:
CHK_3199
Butyryl-CoA dehydrogenase.
  
 0.958
CHK_2149
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.934
CHK_3211
4-hydroxybutanoyl-CoA dehydratase; Vinylacetyl-CoA Delta-isomerase.
    
  0.931
CHK_1308
Pyruvate-flavodoxin oxidoreductase.
     
 0.916
CHK_2148
3-ketoacyl-CoA thiolase, Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.909
CHK_3208
4-hydroxybutyrate:acetyl-CoA CoA transferase.
  
 
 0.893
CHK_2568
Acetyl-coenzyme A carboxyl transferase beta chain; Propionyl-CoA carboxylase beta chain.
  
 
 0.868
CHK_2566
Oxaloacetate decarboxylase alpha chain.
  
 
 0.859
CHK_2104
Catalase.
   
 0.843
CHK_3210
NifU-like domain protein.
  
    0.842
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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