STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG28578.1SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1040 aa)    
Predicted Functional Partners:
KRG28579.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.933
KRG29007.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.667
KRG28039.1
Glycan metabolism protein RagB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.605
KRG27605.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.594
KRG28498.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.589
KRG28581.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.589
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
   0.571
KRG30740.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.568
KRG30741.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.568
KRG29103.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.568
Your Current Organism:
Salegentibacter mishustinae
NCBI taxonomy Id: 270918
Other names: DSM 23404, KCTC 12263, KMM 6049, LMG 22584, LMG:22584, NBRC 100592, S. mishustinae, Salegentibacter mishustinae Nedashkovskaya et al. 2005
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