STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG27488.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)    
Predicted Functional Partners:
KRG27489.1
Nicotinamide mononucleotide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.900
KRG27490.1
Nicotinate-nucleotide adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.897
KRG27491.1
NAD metabolism ATPase/kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.830
KRG27492.1
Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.806
KRG27486.1
4-phosphopantetheinyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.
 
     0.574
KRG27487.1
Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).
       0.480
Your Current Organism:
Salegentibacter mishustinae
NCBI taxonomy Id: 270918
Other names: DSM 23404, KCTC 12263, KMM 6049, LMG 22584, LMG:22584, NBRC 100592, S. mishustinae, Salegentibacter mishustinae Nedashkovskaya et al. 2005
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