Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRG27322.1 | KRG30140.1 | APR42_12545 | APR42_13200 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.649 |
KRG27322.1 | KRG30168.1 | APR42_12545 | APR42_13345 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aldehyde oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
KRG27322.1 | KRG30287.1 | APR42_12545 | APR42_00045 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
KRG27322.1 | katE | APR42_12545 | APR42_16045 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroperoxidase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.536 |
KRG30140.1 | KRG27322.1 | APR42_13200 | APR42_12545 | Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.649 |
KRG30140.1 | KRG30168.1 | APR42_13200 | APR42_13345 | Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aldehyde oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.703 |
KRG30140.1 | KRG30287.1 | APR42_13200 | APR42_00045 | Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.703 |
KRG30140.1 | katE | APR42_13200 | APR42_16045 | Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroperoxidase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.988 |
KRG30168.1 | KRG27322.1 | APR42_13345 | APR42_12545 | Aldehyde oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
KRG30168.1 | KRG30140.1 | APR42_13345 | APR42_13200 | Aldehyde oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.703 |
KRG30168.1 | katE | APR42_13345 | APR42_16045 | Aldehyde oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroperoxidase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.516 |
KRG30287.1 | KRG27322.1 | APR42_00045 | APR42_12545 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
KRG30287.1 | KRG30140.1 | APR42_00045 | APR42_13200 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.703 |
KRG30287.1 | katE | APR42_00045 | APR42_16045 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroperoxidase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.516 |
katE | KRG27322.1 | APR42_16045 | APR42_12545 | Hydroperoxidase; Serves to protect cells from the toxic effects of hydrogen peroxide. | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.536 |
katE | KRG30140.1 | APR42_16045 | APR42_13200 | Hydroperoxidase; Serves to protect cells from the toxic effects of hydrogen peroxide. | Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.988 |
katE | KRG30168.1 | APR42_16045 | APR42_13345 | Hydroperoxidase; Serves to protect cells from the toxic effects of hydrogen peroxide. | Aldehyde oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.516 |
katE | KRG30287.1 | APR42_16045 | APR42_00045 | Hydroperoxidase; Serves to protect cells from the toxic effects of hydrogen peroxide. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.516 |