STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067DI56Nt_Gln_amidase domain-containing protein. (113 aa)    
Predicted Functional Partners:
A0A067DM97
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.686
A0A067DSS3
Uncharacterized protein.
    
 
 0.546
A0A067HAV4
Uncharacterized protein.
      
 0.487
A0A067FEU0
Uncharacterized protein.
    
 
 0.479
A0A067FNM9
Arginyl-tRNA--protein transferase; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.
      
 0.477
A0A067F4R1
Uncharacterized protein.
    
 
 0.476
A0A067F4V4
Uncharacterized protein.
    
 
 0.476
A0A067FXU9
Protein-serine/threonine kinase.
      
 0.472
A0A067F162
Uncharacterized protein.
      
 0.443
A0A067FA70
Uncharacterized protein.
      
 0.443
Your Current Organism:
Citrus sinensis
NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange
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