STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067DYC3Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (378 aa)    
Predicted Functional Partners:
A0A067FIT9
Tr-type G domain-containing protein.
   
 
 0.902
A0A067EI85
eRF1_1 domain-containing protein.
  
  
 
0.900
A0A067F699
WD_REPEATS_REGION domain-containing protein.
    
 
 0.838
A0A067FY53
Uncharacterized protein.
  
 
 0.815
A0A067E493
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
 
 0.779
A0A067F362
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
    
   0.767
A0A067FYX2
S4 RNA-binding domain-containing protein.
   
   0.760
A0A067GUB7
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
   
   0.760
A0A067HG57
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
    
   0.758
A0A067FB73
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
   0.755
Your Current Organism:
Citrus sinensis
NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.