STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067E024TFIIF_beta domain-containing protein. (246 aa)    
Predicted Functional Partners:
A0A067GFE3
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.991
A0A067EKH4
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
   
 0.981
A0A067FAY0
Uncharacterized protein.
   
 0.979
A0A067FT64
Uncharacterized protein.
   
 0.977
A0A067F124
RPOLD domain-containing protein.
    
 0.974
A0A067EBG6
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
 0.967
A0A067H6W1
RNA_pol_L_2 domain-containing protein.
    
 0.964
A0A067GNG5
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
   
 0.961
A0A067F9B2
Uncharacterized protein.
    
 0.958
A0A067FRJ1
Helicase ATP-binding domain-containing protein.
    
 0.958
Your Current Organism:
Citrus sinensis
NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.