STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067F5Z9CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (190 aa)    
Predicted Functional Partners:
A0A067DQS3
PMEI domain-containing protein.
  
 
  0.534
A0A067E2S8
GUB_WAK_bind domain-containing protein.
  
 
  0.528
A0A067EM98
Uncharacterized protein.
  
 
  0.521
A0A067FAD5
K-box domain-containing protein.
  
 
   0.521
A0A067FCH4
Uncharacterized protein.
  
 
  0.519
A0A067F9Z0
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
 
  0.511
A0A067D2V8
Pectate_lyase_3 domain-containing protein.
  
 
  0.507
A0A067GAE5
Uncharacterized protein.
  
 
  0.506
A0A067DYL2
NmrA domain-containing protein.
  
 
  0.502
A0A067DNC8
LRRNT_2 domain-containing protein.
  
 
  0.501
Your Current Organism:
Citrus sinensis
NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange
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