STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067FJU1Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (293 aa)    
Predicted Functional Partners:
A0A067F8B8
Uncharacterized protein.
    
 
 0.778
A0A067GL85
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.678
A0A067H575
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.678
A0A067G0D8
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.656
A0A067FVE3
Uncharacterized protein.
   
 
 0.628
A0A067G6Y0
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.628
A0A067HB56
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.628
A0A067FPH8
AP3B1_C domain-containing protein.
    
 0.574
A0A067EC59
PSII_BNR domain-containing protein.
    
 0.487
A0A067ECI4
PSII_BNR domain-containing protein.
    
 0.487
Your Current Organism:
Citrus sinensis
NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.