STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067H3R3Uncharacterized protein. (83 aa)    
Predicted Functional Partners:
A0A067EWE5
SRP54 domain-containing protein.
   
 0.977
A0A067H3A3
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
    
 
 0.916
A0A067EES3
Uncharacterized protein.
   
 
 0.893
A0A067EBN2
Uncharacterized protein.
   
 
 0.860
A0A067EK38
Uncharacterized protein.
   
 
 0.860
A0A067FYF8
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
   0.849
A0A067D527
Uncharacterized protein.
   
 
 0.842
A0A067G9R7
Uncharacterized protein.
   
 
 0.842
A0A067E493
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.781
A0A067E0L8
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 
 0.779
Your Current Organism:
Citrus sinensis
NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange
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