STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF87882.1Maltose phosphorylase. (772 aa)    
Predicted Functional Partners:
SHF87867.1
Beta-phosphoglucomutase.
 
 0.999
SHF87902.1
Alpha-amylase.
 
 
 0.972
SHG32346.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
 
 0.941
SHF84677.1
Alpha,alpha-trehalase.
   
 0.859
SHG24708.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
  0.826
SHF98548.1
Glycosyl-hydrolase 97 C-terminal, oligomerisation.
 
  
  0.692
SHF87848.1
Maltose/moltooligosaccharide transporter.
 
    0.662
SHG37511.1
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 
  0.654
SHF73758.1
Glycosidase.
 
 
 0.578
SHG35533.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
    
 0.530
Your Current Organism:
Flavobacterium segetis
NCBI taxonomy Id: 271157
Other names: DSM 19741, F. segetis, Flavobacterium segetis Yi and Chun 2006, Flavobacterium sp. AT1048, IMSNU 14050, JCM 12385, KCTC 12224, strain AT1048
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.