Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF79885.1 | SHF89312.1 | SAMN05444396_101449 | SAMN05444396_102295 | Protein TonB. | Iron complex outermembrane recepter protein. | 0.557 |
SHF80174.1 | SHF89312.1 | SAMN05444396_101462 | SAMN05444396_102295 | FecR family protein. | Iron complex outermembrane recepter protein. | 0.516 |
SHF89298.1 | SHF89312.1 | SAMN05444396_102294 | SAMN05444396_102295 | Prolyl oligopeptidase. | Iron complex outermembrane recepter protein. | 0.507 |
SHF89312.1 | SHF79885.1 | SAMN05444396_102295 | SAMN05444396_101449 | Iron complex outermembrane recepter protein. | Protein TonB. | 0.557 |
SHF89312.1 | SHF80174.1 | SAMN05444396_102295 | SAMN05444396_101462 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.516 |
SHF89312.1 | SHF89298.1 | SAMN05444396_102295 | SAMN05444396_102294 | Iron complex outermembrane recepter protein. | Prolyl oligopeptidase. | 0.507 |
SHF89312.1 | SHF89325.1 | SAMN05444396_102295 | SAMN05444396_102296 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.493 |
SHF89312.1 | SHF94456.1 | SAMN05444396_102295 | SAMN05444396_10310 | Iron complex outermembrane recepter protein. | Outer membrane transport energization protein TonB. | 0.557 |
SHF89312.1 | SHG14559.1 | SAMN05444396_102295 | SAMN05444396_10560 | Iron complex outermembrane recepter protein. | TonB protein C-terminal. | 0.557 |
SHF89312.1 | SHG14574.1 | SAMN05444396_102295 | SAMN05444396_10561 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.557 |
SHF89312.1 | SHG29203.1 | SAMN05444396_102295 | SAMN05444396_107145 | Iron complex outermembrane recepter protein. | Outer membrane transport energization protein TonB. | 0.616 |
SHF89312.1 | SHG37724.1 | SAMN05444396_102295 | SAMN05444396_11055 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.460 |
SHF89325.1 | SHF89312.1 | SAMN05444396_102296 | SAMN05444396_102295 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.493 |
SHF94456.1 | SHF89312.1 | SAMN05444396_10310 | SAMN05444396_102295 | Outer membrane transport energization protein TonB. | Iron complex outermembrane recepter protein. | 0.557 |
SHG14559.1 | SHF89312.1 | SAMN05444396_10560 | SAMN05444396_102295 | TonB protein C-terminal. | Iron complex outermembrane recepter protein. | 0.557 |
SHG14559.1 | SHG14574.1 | SAMN05444396_10560 | SAMN05444396_10561 | TonB protein C-terminal. | Hypothetical protein. | 0.773 |
SHG14574.1 | SHF89312.1 | SAMN05444396_10561 | SAMN05444396_102295 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.557 |
SHG14574.1 | SHG14559.1 | SAMN05444396_10561 | SAMN05444396_10560 | Hypothetical protein. | TonB protein C-terminal. | 0.773 |
SHG29203.1 | SHF89312.1 | SAMN05444396_107145 | SAMN05444396_102295 | Outer membrane transport energization protein TonB. | Iron complex outermembrane recepter protein. | 0.616 |
SHG37724.1 | SHF89312.1 | SAMN05444396_11055 | SAMN05444396_102295 | FecR family protein. | Iron complex outermembrane recepter protein. | 0.460 |