STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG09664.1Hypothetical protein. (252 aa)    
Predicted Functional Partners:
SHG09645.1
Hypothetical protein.
 
     0.839
SHG09630.1
Hypothetical protein.
       0.752
SHG16531.1
Hypothetical protein.
  
     0.679
SHF85683.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
     0.634
SHF86550.1
CarboxypepD_reg-like domain-containing protein.
  
     0.592
SHG09609.1
Hypothetical protein.
       0.576
SHG00142.1
Hypothetical protein.
  
     0.564
SHG27662.1
N-Dimethylarginine dimethylaminohydrolase.
  
     0.561
SHF88014.1
Hypothetical protein.
  
     0.555
SHF97867.1
Putative DNA-binding domain-containing protein.
  
     0.553
Your Current Organism:
Flavobacterium segetis
NCBI taxonomy Id: 271157
Other names: DSM 19741, F. segetis, Flavobacterium segetis Yi and Chun 2006, Flavobacterium sp. AT1048, IMSNU 14050, JCM 12385, KCTC 12224, strain AT1048
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