Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHG10796.1 | SHG18884.1 | SAMN05444396_104362 | SAMN05444396_105288 | Glutamate synthase (NADH) large subunit. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.407 |
| SHG10796.1 | pcm | SAMN05444396_104362 | SAMN05444396_105291 | Glutamate synthase (NADH) large subunit. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.462 |
| SHG18829.1 | SHG18865.1 | SAMN05444396_105285 | SAMN05444396_105287 | DNA polymerase-3 subunit epsilon. | Uncharacterized conserved protein, DUF1015 family. | 0.518 |
| SHG18829.1 | pcm | SAMN05444396_105285 | SAMN05444396_105291 | DNA polymerase-3 subunit epsilon. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.415 |
| SHG18865.1 | SHG18829.1 | SAMN05444396_105287 | SAMN05444396_105285 | Uncharacterized conserved protein, DUF1015 family. | DNA polymerase-3 subunit epsilon. | 0.518 |
| SHG18865.1 | SHG18884.1 | SAMN05444396_105287 | SAMN05444396_105288 | Uncharacterized conserved protein, DUF1015 family. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.659 |
| SHG18865.1 | SHG18899.1 | SAMN05444396_105287 | SAMN05444396_105289 | Uncharacterized conserved protein, DUF1015 family. | Hypothetical protein. | 0.516 |
| SHG18865.1 | SHG18920.1 | SAMN05444396_105287 | SAMN05444396_105290 | Uncharacterized conserved protein, DUF1015 family. | Predicted dehydrogenase. | 0.690 |
| SHG18865.1 | pcm | SAMN05444396_105287 | SAMN05444396_105291 | Uncharacterized conserved protein, DUF1015 family. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.433 |
| SHG18884.1 | SHG10796.1 | SAMN05444396_105288 | SAMN05444396_104362 | 3-hydroxybutyryl-CoA dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.407 |
| SHG18884.1 | SHG18865.1 | SAMN05444396_105288 | SAMN05444396_105287 | 3-hydroxybutyryl-CoA dehydrogenase. | Uncharacterized conserved protein, DUF1015 family. | 0.659 |
| SHG18884.1 | SHG18899.1 | SAMN05444396_105288 | SAMN05444396_105289 | 3-hydroxybutyryl-CoA dehydrogenase. | Hypothetical protein. | 0.701 |
| SHG18884.1 | SHG18920.1 | SAMN05444396_105288 | SAMN05444396_105290 | 3-hydroxybutyryl-CoA dehydrogenase. | Predicted dehydrogenase. | 0.784 |
| SHG18884.1 | pcm | SAMN05444396_105288 | SAMN05444396_105291 | 3-hydroxybutyryl-CoA dehydrogenase. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.568 |
| SHG18899.1 | SHG18865.1 | SAMN05444396_105289 | SAMN05444396_105287 | Hypothetical protein. | Uncharacterized conserved protein, DUF1015 family. | 0.516 |
| SHG18899.1 | SHG18884.1 | SAMN05444396_105289 | SAMN05444396_105288 | Hypothetical protein. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.701 |
| SHG18899.1 | SHG18920.1 | SAMN05444396_105289 | SAMN05444396_105290 | Hypothetical protein. | Predicted dehydrogenase. | 0.773 |
| SHG18899.1 | pcm | SAMN05444396_105289 | SAMN05444396_105291 | Hypothetical protein. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.544 |
| SHG18920.1 | SHG18865.1 | SAMN05444396_105290 | SAMN05444396_105287 | Predicted dehydrogenase. | Uncharacterized conserved protein, DUF1015 family. | 0.690 |
| SHG18920.1 | SHG18884.1 | SAMN05444396_105290 | SAMN05444396_105288 | Predicted dehydrogenase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.784 |
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