Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG23116.1 | SHG23146.1 | SAMN05444396_106132 | SAMN05444396_106134 | Predicted hydrolase of the alpha/beta superfamily. | Hypothetical protein. | 0.905 |
SHG23116.1 | SHG23806.1 | SAMN05444396_106132 | SAMN05444396_106177 | Predicted hydrolase of the alpha/beta superfamily. | Esterase/lipase superfamily enzyme. | 0.755 |
SHG23116.1 | SHG23821.1 | SAMN05444396_106132 | SAMN05444396_106178 | Predicted hydrolase of the alpha/beta superfamily. | Glutathione synthase/RimK-type ligase, ATP-grasp superfamily. | 0.734 |
SHG23116.1 | SHG23838.1 | SAMN05444396_106132 | SAMN05444396_106179 | Predicted hydrolase of the alpha/beta superfamily. | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.586 |
SHG23116.1 | SHG23851.1 | SAMN05444396_106132 | SAMN05444396_106180 | Predicted hydrolase of the alpha/beta superfamily. | GMP synthase-Glutamine amidotransferase. | 0.735 |
SHG23116.1 | SHG23868.1 | SAMN05444396_106132 | SAMN05444396_106181 | Predicted hydrolase of the alpha/beta superfamily. | Hypothetical protein. | 0.740 |
SHG23146.1 | SHG23116.1 | SAMN05444396_106134 | SAMN05444396_106132 | Hypothetical protein. | Predicted hydrolase of the alpha/beta superfamily. | 0.905 |
SHG23146.1 | SHG23806.1 | SAMN05444396_106134 | SAMN05444396_106177 | Hypothetical protein. | Esterase/lipase superfamily enzyme. | 0.789 |
SHG23146.1 | SHG23821.1 | SAMN05444396_106134 | SAMN05444396_106178 | Hypothetical protein. | Glutathione synthase/RimK-type ligase, ATP-grasp superfamily. | 0.777 |
SHG23146.1 | SHG23838.1 | SAMN05444396_106134 | SAMN05444396_106179 | Hypothetical protein. | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.739 |
SHG23146.1 | SHG23851.1 | SAMN05444396_106134 | SAMN05444396_106180 | Hypothetical protein. | GMP synthase-Glutamine amidotransferase. | 0.782 |
SHG23146.1 | SHG23868.1 | SAMN05444396_106134 | SAMN05444396_106181 | Hypothetical protein. | Hypothetical protein. | 0.781 |
SHG23146.1 | SHG33583.1 | SAMN05444396_106134 | SAMN05444396_1093 | Hypothetical protein. | Predicted hydrolase of the alpha/beta superfamily. | 0.569 |
SHG23783.1 | SHG23806.1 | SAMN05444396_106176 | SAMN05444396_106177 | Hypothetical protein. | Esterase/lipase superfamily enzyme. | 0.403 |
SHG23806.1 | SHG23116.1 | SAMN05444396_106177 | SAMN05444396_106132 | Esterase/lipase superfamily enzyme. | Predicted hydrolase of the alpha/beta superfamily. | 0.755 |
SHG23806.1 | SHG23146.1 | SAMN05444396_106177 | SAMN05444396_106134 | Esterase/lipase superfamily enzyme. | Hypothetical protein. | 0.789 |
SHG23806.1 | SHG23783.1 | SAMN05444396_106177 | SAMN05444396_106176 | Esterase/lipase superfamily enzyme. | Hypothetical protein. | 0.403 |
SHG23806.1 | SHG23821.1 | SAMN05444396_106177 | SAMN05444396_106178 | Esterase/lipase superfamily enzyme. | Glutathione synthase/RimK-type ligase, ATP-grasp superfamily. | 0.940 |
SHG23806.1 | SHG23838.1 | SAMN05444396_106177 | SAMN05444396_106179 | Esterase/lipase superfamily enzyme. | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.833 |
SHG23806.1 | SHG23851.1 | SAMN05444396_106177 | SAMN05444396_106180 | Esterase/lipase superfamily enzyme. | GMP synthase-Glutamine amidotransferase. | 0.858 |
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