Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG29046.1 | SHG29059.1 | SAMN05444396_107136 | SAMN05444396_107137 | Hypothetical protein. | Hypothetical protein. | 0.881 |
SHG29046.1 | SHG29079.1 | SAMN05444396_107136 | SAMN05444396_107138 | Hypothetical protein. | Transport and Golgi organisation 2. | 0.505 |
SHG29046.1 | SHG29098.1 | SAMN05444396_107136 | SAMN05444396_107139 | Hypothetical protein. | Hypothetical protein. | 0.587 |
SHG29059.1 | SHG29046.1 | SAMN05444396_107137 | SAMN05444396_107136 | Hypothetical protein. | Hypothetical protein. | 0.881 |
SHG29059.1 | SHG29079.1 | SAMN05444396_107137 | SAMN05444396_107138 | Hypothetical protein. | Transport and Golgi organisation 2. | 0.971 |
SHG29059.1 | SHG29098.1 | SAMN05444396_107137 | SAMN05444396_107139 | Hypothetical protein. | Hypothetical protein. | 0.886 |
SHG29079.1 | SHG29046.1 | SAMN05444396_107138 | SAMN05444396_107136 | Transport and Golgi organisation 2. | Hypothetical protein. | 0.505 |
SHG29079.1 | SHG29059.1 | SAMN05444396_107138 | SAMN05444396_107137 | Transport and Golgi organisation 2. | Hypothetical protein. | 0.971 |
SHG29079.1 | SHG29098.1 | SAMN05444396_107138 | SAMN05444396_107139 | Transport and Golgi organisation 2. | Hypothetical protein. | 0.941 |
SHG29098.1 | SHG29046.1 | SAMN05444396_107139 | SAMN05444396_107136 | Hypothetical protein. | Hypothetical protein. | 0.587 |
SHG29098.1 | SHG29059.1 | SAMN05444396_107139 | SAMN05444396_107137 | Hypothetical protein. | Hypothetical protein. | 0.886 |
SHG29098.1 | SHG29079.1 | SAMN05444396_107139 | SAMN05444396_107138 | Hypothetical protein. | Transport and Golgi organisation 2. | 0.941 |
SHG29098.1 | aroA | SAMN05444396_107139 | SAMN05444396_10325 | Hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.580 |
aroA | SHG29098.1 | SAMN05444396_10325 | SAMN05444396_107139 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Hypothetical protein. | 0.580 |