STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG29335.1Hypothetical protein. (389 aa)    
Predicted Functional Partners:
SHF84605.1
Protein involved in gliding motility SprA.
  
 
 0.999
SHG29315.1
Peptidase family C25.
 
   
 0.902
SHG09974.1
Protein of unknown function.
  
   
 0.816
SHF87080.1
Penicillin-binding protein 2.
  
 0.799
SHG00418.1
Protein of unknown function.
  
 0.799
SHG09182.1
Cell division protein FtsI (penicillin-binding protein 3).
  
 0.799
SHG09068.1
Cell division protein FtsQ.
  
 
 0.766
SHG18639.1
Protein of unknown function.
  
     0.761
SHF86887.1
Probable protein-translocating porin PorT.
  
   
 0.751
SHF98587.1
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA.
    
 
 0.748
Your Current Organism:
Flavobacterium segetis
NCBI taxonomy Id: 271157
Other names: DSM 19741, F. segetis, Flavobacterium segetis Yi and Chun 2006, Flavobacterium sp. AT1048, IMSNU 14050, JCM 12385, KCTC 12224, strain AT1048
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.