STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG30755.1Hydroxylysine kinase /5-phosphonooxy-L-lysine phospho-lyase apoenzyme. (765 aa)    
Predicted Functional Partners:
SHF86339.1
Aspartate kinase.
  
 
 0.965
SHG14315.1
Aspartate kinase.
  
 
 0.965
SHG30738.1
FAD/FMN-containing dehydrogenase.
  
 
 0.910
SHG28881.1
Glycine dehydrogenase; Belongs to the GcvP family.
  
 
 0.869
SHG10796.1
Glutamate synthase (NADH) large subunit.
    
 0.860
SHG30857.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
 0.857
SHG17631.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.847
SHG21512.1
Amino acid adenylation domain-containing protein.
  
 
 0.847
SHG21531.1
Amino acid adenylation domain-containing protein.
  
 
 0.847
SHF79072.1
Branched-chain amino acid aminotransferase.
  
 
 0.818
Your Current Organism:
Flavobacterium segetis
NCBI taxonomy Id: 271157
Other names: DSM 19741, F. segetis, Flavobacterium segetis Yi and Chun 2006, Flavobacterium sp. AT1048, IMSNU 14050, JCM 12385, KCTC 12224, strain AT1048
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.