STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG30913.1solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (554 aa)    
Predicted Functional Partners:
SHG30972.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
     0.734
SHG30950.1
UDPglucose--hexose-1-phosphate uridylyltransferase.
 
     0.708
SHG30987.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
    0.662
SHG30932.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.570
SHG23311.1
Choline dehydrogenase.
  
     0.435
Your Current Organism:
Flavobacterium segetis
NCBI taxonomy Id: 271157
Other names: DSM 19741, F. segetis, Flavobacterium segetis Yi and Chun 2006, Flavobacterium sp. AT1048, IMSNU 14050, JCM 12385, KCTC 12224, strain AT1048
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.