STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG34070.1Cd2+/Zn2+-exporting ATPase. (659 aa)    
Predicted Functional Partners:
SHF84016.1
AraC-type DNA-binding protein.
 
 0.804
SHF84031.1
Protein of unknown function.
  
  0.797
SHF84000.1
Cu2+-exporting ATPase.
  
 
0.792
SHG23603.1
Copper chaperone CopZ.
  
  0.785
SHG40790.1
Copper chaperone CopZ.
  
  0.733
SHG08471.1
Copper chaperone CopZ.
  
  0.732
SHG08885.1
Copper chaperone CopZ.
   
  0.728
SHG23562.1
Copper chaperone CopZ.
   
  0.728
SHG23501.1
Copper-resistance protein, CopA family.
 
 
 0.614
SHG34091.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
    0.560
Your Current Organism:
Flavobacterium segetis
NCBI taxonomy Id: 271157
Other names: DSM 19741, F. segetis, Flavobacterium segetis Yi and Chun 2006, Flavobacterium sp. AT1048, IMSNU 14050, JCM 12385, KCTC 12224, strain AT1048
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.