Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF78016.1 | SHF78036.1 | SAMN05444396_101354 | SAMN05444396_101355 | Beta-carotene 3-hydroxylase. | Phytoene/squalene synthetase. | 0.978 |
SHF78016.1 | SHF78057.1 | SAMN05444396_101354 | SAMN05444396_101356 | Beta-carotene 3-hydroxylase. | Phytoene desaturase. | 0.922 |
SHF78016.1 | SHF88775.1 | SAMN05444396_101354 | SAMN05444396_102261 | Beta-carotene 3-hydroxylase. | Phytoene desaturase. | 0.480 |
SHF78016.1 | SHG42938.1 | SAMN05444396_101354 | SAMN05444396_11224 | Beta-carotene 3-hydroxylase. | Lycopene beta-cyclase. | 0.724 |
SHF78036.1 | SHF78016.1 | SAMN05444396_101355 | SAMN05444396_101354 | Phytoene/squalene synthetase. | Beta-carotene 3-hydroxylase. | 0.978 |
SHF78036.1 | SHF78057.1 | SAMN05444396_101355 | SAMN05444396_101356 | Phytoene/squalene synthetase. | Phytoene desaturase. | 0.999 |
SHF78036.1 | SHF88775.1 | SAMN05444396_101355 | SAMN05444396_102261 | Phytoene/squalene synthetase. | Phytoene desaturase. | 0.976 |
SHF78036.1 | SHF88789.1 | SAMN05444396_101355 | SAMN05444396_102262 | Phytoene/squalene synthetase. | Beta-carotene 3-hydroxylase. | 0.945 |
SHF78036.1 | SHG21512.1 | SAMN05444396_101355 | SAMN05444396_10634 | Phytoene/squalene synthetase. | Amino acid adenylation domain-containing protein. | 0.674 |
SHF78036.1 | SHG21531.1 | SAMN05444396_101355 | SAMN05444396_10635 | Phytoene/squalene synthetase. | Amino acid adenylation domain-containing protein. | 0.674 |
SHF78036.1 | SHG42938.1 | SAMN05444396_101355 | SAMN05444396_11224 | Phytoene/squalene synthetase. | Lycopene beta-cyclase. | 0.573 |
SHF78057.1 | SHF78016.1 | SAMN05444396_101356 | SAMN05444396_101354 | Phytoene desaturase. | Beta-carotene 3-hydroxylase. | 0.922 |
SHF78057.1 | SHF78036.1 | SAMN05444396_101356 | SAMN05444396_101355 | Phytoene desaturase. | Phytoene/squalene synthetase. | 0.999 |
SHF78057.1 | SHF88775.1 | SAMN05444396_101356 | SAMN05444396_102261 | Phytoene desaturase. | Phytoene desaturase. | 0.524 |
SHF78057.1 | SHF88789.1 | SAMN05444396_101356 | SAMN05444396_102262 | Phytoene desaturase. | Beta-carotene 3-hydroxylase. | 0.802 |
SHF78057.1 | SHG42938.1 | SAMN05444396_101356 | SAMN05444396_11224 | Phytoene desaturase. | Lycopene beta-cyclase. | 0.950 |
SHF86707.1 | SHF86723.1 | SAMN05444396_102150 | SAMN05444396_102151 | Electron transfer flavoprotein beta subunit. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.999 |
SHF86707.1 | SHG21512.1 | SAMN05444396_102150 | SAMN05444396_10634 | Electron transfer flavoprotein beta subunit. | Amino acid adenylation domain-containing protein. | 0.428 |
SHF86707.1 | SHG21531.1 | SAMN05444396_102150 | SAMN05444396_10635 | Electron transfer flavoprotein beta subunit. | Amino acid adenylation domain-containing protein. | 0.428 |
SHF86707.1 | SHG42938.1 | SAMN05444396_102150 | SAMN05444396_11224 | Electron transfer flavoprotein beta subunit. | Lycopene beta-cyclase. | 0.828 |
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