STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH54798.1Protein SCO1/2. (210 aa)    
Predicted Functional Partners:
SEH76704.1
Thiol-disulfide isomerase or thioredoxin.
 
   0.856
SEH68047.1
Thiol-disulfide isomerase or thioredoxin.
 
   0.849
SEH54634.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.819
SEH51970.1
Cytochrome c oxidase subunit 2.
 
 
 0.808
SEH82911.1
Cytochrome c oxidase subunit 2.
 
 
 0.806
SEH54761.1
Cytochrome c oxidase assembly protein subunit 15.
 
 
 0.796
SEH81669.1
Cytochrome c oxidase subunit 2.
  
 
 0.758
SEH85863.1
Hypothetical protein.
 
   
 0.753
SEH54723.1
Cytochrome oxidase assembly protein ShyY1.
 
  
 0.741
ccmG
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
 
   0.740
Your Current Organism:
Pseudomonas xanthomarina
NCBI taxonomy Id: 271420
Other names: CCUG 46543, DSM 18231, JCM 12468, NRIC 0617, P. xanthomarina, Pseudomonas xanthomarina Romanenko et al. 2005
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