Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH50666.1 | SEH60487.1 | SAMN05216535_0126 | SAMN05216535_0775 | Flagellar FliL protein. | Endonuclease YncB, thermonuclease family. | 0.693 |
SEH54102.1 | SEH60487.1 | SAMN05216535_0393 | SAMN05216535_0775 | 5'-nucleotidase. | Endonuclease YncB, thermonuclease family. | 0.657 |
SEH54102.1 | guaA | SAMN05216535_0393 | SAMN05216535_3273 | 5'-nucleotidase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.802 |
SEH54102.1 | guaB | SAMN05216535_0393 | SAMN05216535_3274 | 5'-nucleotidase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.842 |
SEH54102.1 | purA | SAMN05216535_0393 | SAMN05216535_3789 | 5'-nucleotidase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.720 |
SEH54102.1 | purH | SAMN05216535_0393 | SAMN05216535_3593 | 5'-nucleotidase. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.699 |
SEH60487.1 | SEH50666.1 | SAMN05216535_0775 | SAMN05216535_0126 | Endonuclease YncB, thermonuclease family. | Flagellar FliL protein. | 0.693 |
SEH60487.1 | SEH54102.1 | SAMN05216535_0775 | SAMN05216535_0393 | Endonuclease YncB, thermonuclease family. | 5'-nucleotidase. | 0.657 |
SEH60487.1 | SEH97205.1 | SAMN05216535_0775 | SAMN05216535_3072 | Endonuclease YncB, thermonuclease family. | Flagellar FliL protein. | 0.685 |
SEH60487.1 | guaA | SAMN05216535_0775 | SAMN05216535_3273 | Endonuclease YncB, thermonuclease family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.744 |
SEH60487.1 | guaB | SAMN05216535_0775 | SAMN05216535_3274 | Endonuclease YncB, thermonuclease family. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.760 |
SEH60487.1 | nadD | SAMN05216535_0775 | SAMN05216535_3912 | Endonuclease YncB, thermonuclease family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.662 |
SEH60487.1 | purA | SAMN05216535_0775 | SAMN05216535_3789 | Endonuclease YncB, thermonuclease family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.660 |
SEH60487.1 | purH | SAMN05216535_0775 | SAMN05216535_3593 | Endonuclease YncB, thermonuclease family. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.659 |
SEH60487.1 | rnpA | SAMN05216535_0775 | SAMN05216535_0347 | Endonuclease YncB, thermonuclease family. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.734 |
SEH60487.1 | rpmE | SAMN05216535_0775 | SAMN05216535_0774 | Endonuclease YncB, thermonuclease family. | LSU ribosomal protein L31P; Binds the 23S rRNA. | 0.731 |
SEH97205.1 | SEH60487.1 | SAMN05216535_3072 | SAMN05216535_0775 | Flagellar FliL protein. | Endonuclease YncB, thermonuclease family. | 0.685 |
guaA | SEH54102.1 | SAMN05216535_3273 | SAMN05216535_0393 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 5'-nucleotidase. | 0.802 |
guaA | SEH60487.1 | SAMN05216535_3273 | SAMN05216535_0775 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Endonuclease YncB, thermonuclease family. | 0.744 |
guaA | guaB | SAMN05216535_3273 | SAMN05216535_3274 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.999 |
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