Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH73087.1 | SEH73102.1 | SAMN05216535_1518 | SAMN05216535_1519 | Capsular exopolysaccharide family. | UDPglucose 6-dehydrogenase. | 0.723 |
SEH73087.1 | SEH73122.1 | SAMN05216535_1518 | SAMN05216535_1520 | Capsular exopolysaccharide family. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.652 |
SEH73087.1 | SEH73139.1 | SAMN05216535_1518 | SAMN05216535_1521 | Capsular exopolysaccharide family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.655 |
SEH73087.1 | SEH73156.1 | SAMN05216535_1518 | SAMN05216535_1522 | Capsular exopolysaccharide family. | Hypothetical protein. | 0.451 |
SEH73087.1 | SEH73227.1 | SAMN05216535_1518 | SAMN05216535_1526 | Capsular exopolysaccharide family. | Putative colanic acid biosynthesis glycosyltransferase. | 0.516 |
SEH73087.1 | SEH79789.1 | SAMN05216535_1518 | SAMN05216535_1952 | Capsular exopolysaccharide family. | GDP-D-mannose dehydratase. | 0.484 |
SEH73087.1 | SEI07194.1 | SAMN05216535_1518 | SAMN05216535_3949 | Capsular exopolysaccharide family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.429 |
SEH73087.1 | cpsB | SAMN05216535_1518 | SAMN05216535_1358 | Capsular exopolysaccharide family. | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.901 |
SEH73087.1 | fcl | SAMN05216535_1518 | SAMN05216535_1524 | Capsular exopolysaccharide family. | GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. | 0.557 |
SEH73087.1 | gmd | SAMN05216535_1518 | SAMN05216535_1523 | Capsular exopolysaccharide family. | GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.705 |
SEH73102.1 | SEH73087.1 | SAMN05216535_1519 | SAMN05216535_1518 | UDPglucose 6-dehydrogenase. | Capsular exopolysaccharide family. | 0.723 |
SEH73102.1 | SEH73122.1 | SAMN05216535_1519 | SAMN05216535_1520 | UDPglucose 6-dehydrogenase. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.925 |
SEH73102.1 | SEH73139.1 | SAMN05216535_1519 | SAMN05216535_1521 | UDPglucose 6-dehydrogenase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.880 |
SEH73102.1 | SEH73156.1 | SAMN05216535_1519 | SAMN05216535_1522 | UDPglucose 6-dehydrogenase. | Hypothetical protein. | 0.737 |
SEH73102.1 | SEH73227.1 | SAMN05216535_1519 | SAMN05216535_1526 | UDPglucose 6-dehydrogenase. | Putative colanic acid biosynthesis glycosyltransferase. | 0.532 |
SEH73102.1 | SEH79789.1 | SAMN05216535_1519 | SAMN05216535_1952 | UDPglucose 6-dehydrogenase. | GDP-D-mannose dehydratase. | 0.622 |
SEH73102.1 | SEI07194.1 | SAMN05216535_1519 | SAMN05216535_3949 | UDPglucose 6-dehydrogenase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.606 |
SEH73102.1 | cpsB | SAMN05216535_1519 | SAMN05216535_1358 | UDPglucose 6-dehydrogenase. | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.910 |
SEH73102.1 | fcl | SAMN05216535_1519 | SAMN05216535_1524 | UDPglucose 6-dehydrogenase. | GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. | 0.936 |
SEH73102.1 | gmd | SAMN05216535_1519 | SAMN05216535_1523 | UDPglucose 6-dehydrogenase. | GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.892 |
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