Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEI07149.1 | dbpA | SAMN05216535_3944 | SAMN05216535_4058 | ADP-ribose pyrophosphatase. | ATP-independent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.732 |
| SEI07149.1 | deaD | SAMN05216535_3944 | SAMN05216535_1901 | ADP-ribose pyrophosphatase. | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.732 |
| SEI07149.1 | rhlB | SAMN05216535_3944 | SAMN05216535_1366 | ADP-ribose pyrophosphatase. | ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily. | 0.732 |
| SEI07149.1 | rhlE | SAMN05216535_3944 | SAMN05216535_3851 | ADP-ribose pyrophosphatase. | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | 0.732 |
| SEI07149.1 | srmB | SAMN05216535_3944 | SAMN05216535_3402 | ADP-ribose pyrophosphatase. | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | 0.732 |
| SEI07149.1 | yjeF | SAMN05216535_3944 | SAMN05216535_3799 | ADP-ribose pyrophosphatase. | NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...] | 0.976 |
| amiC | yjeE | SAMN05216535_3797 | SAMN05216535_3798 | N-acetylmuramoyl-L-alanine amidase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.878 |
| amiC | yjeF | SAMN05216535_3797 | SAMN05216535_3799 | N-acetylmuramoyl-L-alanine amidase. | NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...] | 0.919 |
| dbpA | SEI07149.1 | SAMN05216535_4058 | SAMN05216535_3944 | ATP-independent RNA helicase DbpA; Belongs to the DEAD box helicase family. | ADP-ribose pyrophosphatase. | 0.732 |
| dbpA | nudH | SAMN05216535_4058 | SAMN05216535_0632 | ATP-independent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Putative (di)nucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.740 |
| dbpA | nudL | SAMN05216535_4058 | SAMN05216535_1379 | ATP-independent RNA helicase DbpA; Belongs to the DEAD box helicase family. | NUDIX domain-containing protein. | 0.732 |
| dbpA | yjeF | SAMN05216535_4058 | SAMN05216535_3799 | ATP-independent RNA helicase DbpA; Belongs to the DEAD box helicase family. | NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...] | 0.913 |
| deaD | SEI07149.1 | SAMN05216535_1901 | SAMN05216535_3944 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | ADP-ribose pyrophosphatase. | 0.732 |
| deaD | nudH | SAMN05216535_1901 | SAMN05216535_0632 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | Putative (di)nucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.740 |
| deaD | nudL | SAMN05216535_1901 | SAMN05216535_1379 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | NUDIX domain-containing protein. | 0.732 |
| deaD | rhlB | SAMN05216535_1901 | SAMN05216535_1366 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily. | 0.628 |
| deaD | rhlE | SAMN05216535_1901 | SAMN05216535_3851 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | 0.594 |
| deaD | yjeF | SAMN05216535_1901 | SAMN05216535_3799 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...] | 0.913 |
| nudH | dbpA | SAMN05216535_0632 | SAMN05216535_4058 | Putative (di)nucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | ATP-independent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.740 |
| nudH | deaD | SAMN05216535_0632 | SAMN05216535_1901 | Putative (di)nucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.740 |
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