STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI06423.1Branched-chain amino acid transport system substrate-binding protein. (381 aa)    
Predicted Functional Partners:
SEI06448.1
Branched-chain amino acid transport system permease protein.
 
 
 0.989
SEI06456.1
Branched-chain amino acid transport system permease protein.
 
 
 0.979
SEI06440.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.977
SEI06431.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.970
livM
L-leucine ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.962
livH
L-leucine ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.933
livG
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.926
livF-2
L-leucine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.904
SEH57967.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.890
SEH89311.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.881
Your Current Organism:
Pseudomonas xanthomarina
NCBI taxonomy Id: 271420
Other names: CCUG 46543, DSM 18231, JCM 12468, NRIC 0617, P. xanthomarina, Pseudomonas xanthomarina Romanenko et al. 2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.