STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI07405.1Glycosyl transferase family 2. (306 aa)    
Predicted Functional Partners:
SEI07397.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.859
SEI07388.1
Alpha-1,3-rhamnosyltransferase.
 
    
0.838
SEI07413.1
Carbamoyltransferase.
       0.801
SEI07431.1
Lipopolysaccharide kinase (Kdo/WaaP) family protein.
  
   0.586
waaP
Heptose I phosphotransferase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
  
 
  0.578
SEI07277.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing).
  
 
 0.568
SEH77381.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.559
SEI07439.1
Lipopolysaccharide kinase (Kdo/WaaP) family protein.
  
    0.534
SEI07423.1
Lipopolysaccharide kinase (Kdo/WaaP) family protein.
       0.526
waaG
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase.
  
 
  0.475
Your Current Organism:
Pseudomonas xanthomarina
NCBI taxonomy Id: 271420
Other names: CCUG 46543, DSM 18231, JCM 12468, NRIC 0617, P. xanthomarina, Pseudomonas xanthomarina Romanenko et al. 2005
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