Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAM57023.1 | SAM57024.1 | CHUV0807_0115 | CHUV0807_0116 | DNA alkylation repair enzyme. | tRNAHis-5'-guanylyltransferase. | 0.773 |
SAM57023.1 | SAM57026.1 | CHUV0807_0115 | CHUV0807_0117 | DNA alkylation repair enzyme. | Hypothetical protein. | 0.773 |
SAM57023.1 | rtcR | CHUV0807_0115 | CHUV0807_0114 | DNA alkylation repair enzyme. | Transcriptional regulatory protein RtcR. | 0.410 |
SAM57024.1 | SAM57023.1 | CHUV0807_0116 | CHUV0807_0115 | tRNAHis-5'-guanylyltransferase. | DNA alkylation repair enzyme. | 0.773 |
SAM57024.1 | SAM57026.1 | CHUV0807_0116 | CHUV0807_0117 | tRNAHis-5'-guanylyltransferase. | Hypothetical protein. | 0.952 |
SAM57024.1 | SAY99624.1 | CHUV0807_0116 | CHUV0807_1575 | tRNAHis-5'-guanylyltransferase. | WD-40 repeat protein. | 0.532 |
SAM57024.1 | rtcR | CHUV0807_0116 | CHUV0807_0114 | tRNAHis-5'-guanylyltransferase. | Transcriptional regulatory protein RtcR. | 0.410 |
SAM57026.1 | SAM57023.1 | CHUV0807_0117 | CHUV0807_0115 | Hypothetical protein. | DNA alkylation repair enzyme. | 0.773 |
SAM57026.1 | SAM57024.1 | CHUV0807_0117 | CHUV0807_0116 | Hypothetical protein. | tRNAHis-5'-guanylyltransferase. | 0.952 |
SAM57026.1 | SAY99624.1 | CHUV0807_0117 | CHUV0807_1575 | Hypothetical protein. | WD-40 repeat protein. | 0.427 |
SAM57026.1 | rtcR | CHUV0807_0117 | CHUV0807_0114 | Hypothetical protein. | Transcriptional regulatory protein RtcR. | 0.410 |
SAY99624.1 | SAM57024.1 | CHUV0807_1575 | CHUV0807_0116 | WD-40 repeat protein. | tRNAHis-5'-guanylyltransferase. | 0.532 |
SAY99624.1 | SAM57026.1 | CHUV0807_1575 | CHUV0807_0117 | WD-40 repeat protein. | Hypothetical protein. | 0.427 |
rtcR | SAM57023.1 | CHUV0807_0114 | CHUV0807_0115 | Transcriptional regulatory protein RtcR. | DNA alkylation repair enzyme. | 0.410 |
rtcR | SAM57024.1 | CHUV0807_0114 | CHUV0807_0116 | Transcriptional regulatory protein RtcR. | tRNAHis-5'-guanylyltransferase. | 0.410 |
rtcR | SAM57026.1 | CHUV0807_0114 | CHUV0807_0117 | Transcriptional regulatory protein RtcR. | Hypothetical protein. | 0.410 |