STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ManX_3PTS system, N-acetylgalactosamine-and galactosamine-specific IIA component. (144 aa)    
Predicted Functional Partners:
agaC
PTS system, N-acetylgalactosamine-specific IIC component.
 
 0.997
agaD
PTS system, mannose-specific IID component.
 
 0.997
manX
PTS system, N-acetylgalactosamine-specific IIB component.
 
 
 0.996
ptsH
Phosphotransferase system, phosphocarrier protein HPr.
   
 0.983
manZ
PTS system, mannose-specific IID component.
 
 
 0.910
manY
PTS system, mannose-specific IIC component.
 
 
 0.910
manZ2
PTS system, mannose-specific IID component.
 
 
 0.910
manY2
PTS system, mannose-specific IIC component.
 
 
 0.910
agaS
Galactosamine-6-phosphate isomerase.
 
    0.825
scrA
PTS system, sucrose-specific IIB component / PTS system, sucrose-specific IIC component.
 
  
 0.633
Your Current Organism:
Cardiobacterium hominis
NCBI taxonomy Id: 2718
Other names: ATCC 15826, C. hominis, CCUG 2711, CIP 70.70, DSM 8339, LMG 3916, LMG:3916, NCTC 10426
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.