STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAY97709.1Short-chain dehydrodenase (gene dltE). (243 aa)    
Predicted Functional Partners:
SAM65350.1
Probable short chain dehydrogenase.
  
     0.748
SAM66404.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.730
srlD
Sorbitol-6-phosphate 2-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.588
fabG3
3-oxoacyl-[ACP] reductase.
  
     0.577
SAY97678.1
Glutathione S-transferase.
       0.561
SAM60067.1
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.517
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.505
coaBC
Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
       0.505
yqjQ
Oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.448
Your Current Organism:
Cardiobacterium hominis
NCBI taxonomy Id: 2718
Other names: ATCC 15826, C. hominis, CCUG 2711, CIP 70.70, DSM 8339, LMG 3916, LMG:3916, NCTC 10426
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