STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAM71616.1Phage protein. (532 aa)    
Predicted Functional Partners:
SAM71604.1
Phage (Mu-like) virion morphogenesis protein.
 
     0.947
SAM71562.1
Virion morphogenesis protein.
 
     0.850
SAM71660.1
Negative regulator of beta-lactamase expression.
 
     0.823
SAM71619.1
Phage DNA-binding protein.
  
    0.808
SAM66301.1
Mu-like prophage FluMu protein gp29.
 
    0.800
SAM71701.1
Phage protein.
 
    0.797
SAM66318.1
FIG00698681: hypothetical protein.
 
    0.791
SAM71755.1
Phage transposase.
 
    0.787
SAM71611.1
Mu-like prophage FluMu protein gp29.
  
    0.783
SAM63839.1
Phage (Mu-like) virion morphogenesis protein.
 
     0.779
Your Current Organism:
Cardiobacterium hominis
NCBI taxonomy Id: 2718
Other names: ATCC 15826, C. hominis, CCUG 2711, CIP 70.70, DSM 8339, LMG 3916, LMG:3916, NCTC 10426
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.