STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ55658.1ABC-type transporter, integral membrane subunit; PFAM: ABC 3 transport family; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: ava:Ava_1599 hypothetical protein; PFAM: ABC-3; SPTR: Permease protein of ABC transporter. (287 aa)    
Predicted Functional Partners:
AFZ55657.1
Phosphonate-transporting ATPase; PFAM: ABC transporter; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: naz:Aazo_0842 ABC transporter-like protein protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein.
 
 
 0.987
AFZ55656.1
PFAM: Periplasmic solute binding protein family; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: naz:Aazo_0843 periplasmic solute-binding protein; PFAM: ABC transporter metal-binding lipoprotein; SPTR: Periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
 0.976
AFZ56920.1
PFAM: ABC transporter; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: naz:Aazo_4569 ABC transporter-like protein protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein.
 
 
 0.972
AFZ57187.1
PFAM: Periplasmic solute binding protein family; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: npu:Npun_F4924 periplasmic solute binding protein; PFAM: ABC transporter metal-binding lipoprotein; SPTR: Periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
 0.948
AFZ56921.1
PFAM: Periplasmic solute binding protein family; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: naz:Aazo_4568 periplasmic solute-binding protein; PFAM: ABC transporter metal-binding lipoprotein; SPTR: Periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
 0.916
AFZ56918.1
ABC-type transporter, integral membrane subunit; PFAM: ABC 3 transport family; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: naz:Aazo_4571 ABC-3 protein; PFAM: ABC-3; SPTR: ABC-3 protein.
  
  
 
0.504
AFZ58419.1
Polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR001638:IPR000515:IPR001320:IPR010065; KEGG: npu:Npun_F2876 polar amino acid ABC transporter, inner membrane subunit; PFAM: Extracellular solute-binding protein, family 3; Binding-protein-dependent transport systems inne [...]
  
 
 0.476
AFZ59945.1
Sulfate-transporting ATPase; PFAM: ABC transporter; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: naz:Aazo_4389 ABC transporter-like protein protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein.
     
 0.449
AFZ60667.1
Peptidase M50; PFAM: CBS domain; Peptidase family M50; COGs: COG1994 Zn-dependent protease; InterPro IPR000644:IPR008915; KEGG: npu:Npun_R5268 peptidase M50; PFAM: Peptidase M50; Cystathionine beta-synthase, core; SPTR: Peptidase M50; Belongs to the peptidase M50B family.
 
 
 0.447
AFZ57801.1
PFAM: ABC-2 type transporter; InterPro IPR013525; KEGG: naz:Aazo_3861 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter.
 
  
  0.433
Your Current Organism:
Anabaena cylindrica
NCBI taxonomy Id: 272123
Other names: A. cylindrica PCC 7122, Anabaena cylindrica IAM M-1, Anabaena cylindrica NIES-19, Anabaena cylindrica PCC 7122, Anabaena cylindrica UTEX B 629, Anabaena sp. ATCC 27899, Anabaena sp. PCC 7122
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