STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ56222.1PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: naz:Aazo_0189 pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat protein. (450 aa)    
Predicted Functional Partners:
AFZ59963.1
KEGG: naz:Aazo_1459 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.723
AFZ56236.1
PFAM: Protein of unknown function (DUF3082); KEGG: ava:Ava_4888 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.707
AFZ58970.1
KEGG: naz:Aazo_2652 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.699
AFZ59565.1
KEGG: naz:Aazo_0228 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.698
AFZ58806.1
PFAM: Late competence development protein ComFB; InterPro IPR019657; KEGG: naz:Aazo_4183 late competence development protein ComFB; PFAM: Late competence development protein ComFB; SPTR: Late competence development protein ComFB.
  
     0.695
AFZ59108.1
KEGG: naz:Aazo_3600 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.687
AFZ59420.1
PFAM: Protein of unknown function (DUF3318); KEGG: npu:Npun_F4335 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.682
AFZ60801.1
PFAM: Protein of unknown function (DUF3038); KEGG: naz:Aazo_2324 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.673
AFZ56479.1
KEGG: naz:Aazo_4792 hypothetical protein; SPTR: Asl3517 protein.
  
     0.672
AFZ56598.1
OpcA protein; PFAM: Glucose-6-phosphate dehydrogenase subunit; Putative peptidoglycan binding domain; TIGRFAM: opcA protein; COGs: COG3429 Glucose-6-P dehydrogenase subunit; InterPro IPR002477:IPR019297:IPR004555; KEGG: naz:Aazo_1092 OpcA protein; PFAM: Glucose-6-phosphate dehydrogenase subunit; Peptidoglycan binding-like; SPTR: OpcA protein; TIGRFAM: OpcA.
  
     0.669
Your Current Organism:
Anabaena cylindrica
NCBI taxonomy Id: 272123
Other names: A. cylindrica PCC 7122, Anabaena cylindrica IAM M-1, Anabaena cylindrica NIES-19, Anabaena cylindrica PCC 7122, Anabaena cylindrica UTEX B 629, Anabaena sp. ATCC 27899, Anabaena sp. PCC 7122
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