STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ56644.1Ion transport 2 domain protein; PFAM: Inward rectifier potassium channel; InterPro IPR013099; KEGG: npu:Npun_F5454 K+ channel inward rectifier domain-containing protein; PFAM: Ion transport 2; SPTR: K+ channel, inward rectifier, conserved region 2 domain protein. (308 aa)    
Predicted Functional Partners:
AFZ56643.1
PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: cyn:Cyan7425_2543 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1.
       0.549
AFZ56996.1
Hypothetical protein; PFAM: Conserved nitrate reductase-associated protein (Nitr_red_assoc); TIGRFAM: conserved hypothetical protein; InterPro IPR013481; KEGG: ana:alr0614 hypothetical protein; PFAM: Conserved hypothetical protein CHP02664, nitrate reductase-associated; SPTR: Alr0614 protein; TIGRFAM: Conserved hypothetical protein CHP02664, nitrate reductase-associated.
  
     0.528
AFZ57777.1
PFAM: Bacterial low temperature requirement A protein (LtrA); COGs: COG4292 membrane protein; InterPro IPR010640; KEGG: npu:Npun_R4883 low temperature requirement A; PFAM: Low temperature requirement A; SPTR: Low temperature requirement A.
 
      0.408
Your Current Organism:
Anabaena cylindrica
NCBI taxonomy Id: 272123
Other names: A. cylindrica PCC 7122, Anabaena cylindrica IAM M-1, Anabaena cylindrica NIES-19, Anabaena cylindrica PCC 7122, Anabaena cylindrica UTEX B 629, Anabaena sp. ATCC 27899, Anabaena sp. PCC 7122
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