STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ57180.1Iron-regulated ABC transporter membrane component SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825:IPR010231; KEGG: ana:alr2492 cysteine desulfurase activator complex subunit SufB; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: Alr2492 protein; TIGRFAM: SUF system FeS cluster assembly, SufB. (479 aa)    
Predicted Functional Partners:
AFZ57181.1
PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003593:IPR003439:IPR010230; KEGG: naz:Aazo_0797 FeS assembly ATPase SufC; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: FeS assembly ATPase SufC; TIGRFAM: ATPase SufC, SUF system FeS cluster assembly.
 
 0.999
AFZ57183.1
Cysteine desulfurase; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192:IPR010970; KEGG: naz:Aazo_0799 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Selenocysteine lyase; SPTR: Cysteine desulfurase, SufS subfamily; TIGRFAM: Cysteine desulfurase, SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.955
AFZ57583.1
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.857
AFZ55848.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein, VC1184 subfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192:IPR011340; KEGG: naz:Aazo_3645 cysteine desulfurase family protein; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase family protein; TIGRFAM: Cysteine desulfurase-related.
 
 
 0.833
AFZ57182.1
PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825:IPR011542; KEGG: naz:Aazo_0798 FeS assembly protein SufD; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD.
 
   
0.782
AFZ58776.1
Cysteine desulfurase; PFAM: Aminotransferase class-V; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: npu:Npun_F1365 aminotransferase, class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase, class V.
 
 
 0.742
AFZ56257.1
PFAM: Fe-S metabolism associated domain; COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: naz:Aazo_5125 Fe-S metabolism associated SufE; PFAM: Fe-S metabolism associated SufE; SPTR: Fe-S metabolism associated SufE.
 
 
 0.674
AFZ57179.1
Transcriptional regulator; PFAM: HTH domain; TIGRFAM: iron-sulfur cluster biosynthesis transcriptional regulator SufR; COGs: COG2345 transcriptional regulator protein; InterPro IPR001845:IPR014075; KEGG: ana:all2491 hypothetical protein; PFAM: HTH transcriptional regulator, ArsR; SPTR: All2491 protein; TIGRFAM: SUF system FeS cluster assembly, SufR regulator, cyanobacteria; manually curated.
  
  
 0.592
AFZ57178.1
KEGG: naz:Aazo_0794 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.451
AFZ57685.1
PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR000361:IPR016092; KEGG: naz:Aazo_1343 iron-sulfur cluster assembly accessory protein; PFAM: FeS cluster biogenesis; SPTR: Iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; Belongs to the HesB/IscA family.
  
 
 0.446
Your Current Organism:
Anabaena cylindrica
NCBI taxonomy Id: 272123
Other names: A. cylindrica PCC 7122, Anabaena cylindrica IAM M-1, Anabaena cylindrica NIES-19, Anabaena cylindrica PCC 7122, Anabaena cylindrica UTEX B 629, Anabaena sp. ATCC 27899, Anabaena sp. PCC 7122
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