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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ57396.1KEGG: npu:Npun_R1851 hypothetical protein; SPTR: Putative uncharacterized protein. (430 aa)    
Predicted Functional Partners:
recA
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
    
 0.828
AFZ57394.1
PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR001962; KEGG: npu:Npun_R1853 asparagine synthase; PFAM: Asparagine synthase; SPTR: Asparagine synthase.
       0.784
AFZ57393.1
KEGG: npu:Npun_R1854 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.768
AFZ57395.1
PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR022644:IPR022643; KEGG: npu:Npun_R1852 Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2, C-terminal; Orn/DAP/Arg decarboxylase 2, N-terminal; PRIAM: Diaminopimelate decarboxylase; SPTR: Diaminopimelate decarboxylase.
  
    0.768
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.465
AFZ57397.1
Delta-60 repeat-containing protein; PFAM: Cadherin domain; TIGRFAM: delta-60 repeat domain; InterPro IPR002126:IPR011110:IPR001343:IPR013431; KEGG: cph:Cpha266_2319 FG-GAP repeat-containing protein; PFAM: Cadherin; Two component regulator propeller; Haemolysin-type calcium-binding repeat; SMART: Cadherin; SPTR: FG-GAP repeat protein; TIGRFAM: Delta-60 repeat.
       0.454
AFZ57392.1
PFAM: Phycobilisome Linker polypeptide; InterPro IPR001297; KEGG: naz:Aazo_3481 phycobilisome linker polypeptide; PFAM: Phycobilisome linker domain; SPTR: Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
       0.440
Your Current Organism:
Anabaena cylindrica
NCBI taxonomy Id: 272123
Other names: A. cylindrica PCC 7122, Anabaena cylindrica IAM M-1, Anabaena cylindrica NIES-19, Anabaena cylindrica PCC 7122, Anabaena cylindrica UTEX B 629, Anabaena sp. ATCC 27899, Anabaena sp. PCC 7122
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