Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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[Homology]
Score
AFZ57466.1Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. (332 aa)    
Predicted Functional Partners:
AFZ59364.1
PFAM: PsaD; InterPro IPR003685; KEGG: naz:Aazo_3593 photosystem I protein PsaD; PFAM: Photosystem I PsaD; SPTR: Photosystem I protein PsaD.
  
 
 
 0.960
AFZ56152.1
PFAM: Photosystem I reaction centre subunit III; InterPro IPR003666; KEGG: naz:Aazo_4978 photosystem I reaction center protein PsaF subunit III; PFAM: Photosystem I PsaF, reaction centre subunit III; SPTR: Photosystem I reaction center protein PsaF subunit III.
  
 
   0.918
psaE
Photosystem I reaction center subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
 
   0.915
psbE
Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
 
 
 
 0.895
psbF
Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family.
 
 
 
 0.891
psaB
Photosystem I P700 chlorophyll a apoprotein A2; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family.
  
 
   0.882
AFZ57465.1
Rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin; COGs: COG1773 Rubredoxin; InterPro IPR004039; KEGG: npu:Npun_F5549 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin; Belongs to the rubredoxin family.
 
   
 0.879
psb28
PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; HAMAP: Photosystem II Psb28, class 1; InterPro IPR005610; KEGG: naz:Aazo_0705 photosystem II reaction center protein Psb28; PFAM: Photosystem II Psb28, class 1; SPTR: Photosystem II reaction center Psb28 protein; TIGRFAM: Photosystem II Psb28, class 1; manually curated; Belongs to the Psb28 family.
  
   
 0.858
AFZ55734.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: naz:Aazo_1898 photosystem II manganese-stabilizing protein PsbO; PFAM: Photosystem II PsbO, manganese-stabilising; SPTR: Photosystem II manganese-stabilizing protein PsbO.
  
   
 0.852
psaL
PFAM: Photosystem I reaction centre subunit XI; HAMAP: Photosystem I, reaction centre subunit XI; InterPro IPR022980:IPR003757; KEGG: naz:Aazo_4980 photosystem I reaction centre subunit XI PsaL; PFAM: Photosystem I PsaL, reaction centre subunit XI; SPTR: Photosystem I reaction center subunit XI.
  
 
   0.845
Your Current Organism:
Anabaena cylindrica
NCBI taxonomy Id: 272123
Other names: A. cylindrica PCC 7122, Anabaena cylindrica IAM M-1, Anabaena cylindrica NIES-19, Anabaena cylindrica PCC 7122, Anabaena cylindrica UTEX B 629, Anabaena sp. ATCC 27899, Anabaena sp. PCC 7122
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