STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AFZ57498.1TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736:IPR000445; KEGG: ana:all3087 hypothetical protein; PFAM: Helix-hairpin-helix motif; Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Putative uncharacterized protein. (543 aa)    
Predicted Functional Partners:
AFZ56804.1
KEGG: ava:Ava_1215 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.598
AFZ58929.1
PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: naz:Aazo_0924 comEC/Rec2-like protein; PFAM: ComEC/Rec2-related protein; SPTR: ComEC/Rec2-related protein; TIGRFAM: ComEC/Rec2-related protein.
 
 
 
 0.593
AFZ59043.1
Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: ana:alr2926 hypothetical protein; PFAM: Phosphoribosyltransferase; SPTR: Alr2926 protein.
     
 0.574
AFZ55704.1
PFAM: Single-strand binding protein family; COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: naz:Aazo_3883 single-strand-binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding.
     
 0.570
AFZ56608.1
KEGG: ana:asl3998 hypothetical protein; SPTR: Asl3998 protein.
  
     0.563
AFZ58952.1
KEGG: naz:Aazo_2180 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.560
AFZ56087.1
PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein; InterPro IPR010220; KEGG: ana:alr0871 hypothetical protein; PFAM: CO2 hydration; SPTR: CO2 hydration protein; TIGRFAM: CO2 hydration.
  
     0.548
AFZ56415.1
PFAM: Rho termination factor, N-terminal domain; COGs: COG3330 conserved hypothetical protein; InterPro IPR011112; KEGG: naz:Aazo_2035 Rho termination factor domain-containing protein; PFAM: Rho termination factor, N-terminal; SMART: Rho termination factor, N-terminal; SPTR: Rho termination factor domain protein.
 
     0.530
AFZ59542.1
PFAM: CBS domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000644:IPR003018:IPR000014:IPR001610:IPR 003661:IPR003594:IPR001789:IPR013767:IPR013656:IPR013655; KEGG: chl:Chy400_0428 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; Cystathionine beta-synthase, core; PAS f [...]
   
 0.500
ndhO
NAD(P)H-quinone oxidoreductase subunit O; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.498
Your Current Organism:
Anabaena cylindrica
NCBI taxonomy Id: 272123
Other names: A. cylindrica PCC 7122, Anabaena cylindrica IAM M-1, Anabaena cylindrica NIES-19, Anabaena cylindrica PCC 7122, Anabaena cylindrica UTEX B 629, Anabaena sp. ATCC 27899, Anabaena sp. PCC 7122
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