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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ57608.1PFAM: Helix-turn-helix; Domain of unknown function (DUF955); COGs: COG2856 Zn peptidase; InterPro IPR001387:IPR010359; KEGG: plt:Plut_1806 hypothetical protein; PFAM: Protein of unknown function DUF955; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein. (367 aa)    
Predicted Functional Partners:
AFZ57607.1
Transposase IS891/IS1136/IS1341 family; PFAM: Helix-turn-helix domain; Probable transposase; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959; KEGG: npu:Npun_R2324 IS605 family transposase OrfB; PFAM: Transposase, probable, IS891/IS1136/IS1341; SPTR: Transposase, IS605 OrfB family.
       0.773
AFZ60488.1
Methyltransferase type 11; PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: cyn:Cyan7425_1728 glycosyl transferase family 2; PFAM: Methyltransferase type 11; SPTR: Putative methyltransferase.
  
     0.664
AFZ60725.1
Helix-turn-helix domain protein; PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: vei:Veis_4916 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein.
 
  
 0.609
AFZ58826.1
Hypothetical protein; PFAM: Glycosyl transferase family 8; KEGG: npu:Npun_R2828 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.512
AFZ56521.1
KEGG: ana:all4472 hypothetical protein; SPTR: All4472 protein.
  
     0.467
AFZ59237.1
PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: cpb:Cphamn1_0141 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system.
 
     0.416
Your Current Organism:
Anabaena cylindrica
NCBI taxonomy Id: 272123
Other names: A. cylindrica PCC 7122, Anabaena cylindrica IAM M-1, Anabaena cylindrica NIES-19, Anabaena cylindrica PCC 7122, Anabaena cylindrica UTEX B 629, Anabaena sp. ATCC 27899, Anabaena sp. PCC 7122
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