Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFZ57608.1PFAM: Helix-turn-helix; Domain of unknown function (DUF955); COGs: COG2856 Zn peptidase; InterPro IPR001387:IPR010359; KEGG: plt:Plut_1806 hypothetical protein; PFAM: Protein of unknown function DUF955; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein. (367 aa)    
Predicted Functional Partners:
AFZ57607.1
Transposase IS891/IS1136/IS1341 family; PFAM: Helix-turn-helix domain; Probable transposase; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959; KEGG: npu:Npun_R2324 IS605 family transposase OrfB; PFAM: Transposase, probable, IS891/IS1136/IS1341; SPTR: Transposase, IS605 OrfB family.
       0.773
AFZ60488.1
Methyltransferase type 11; PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: cyn:Cyan7425_1728 glycosyl transferase family 2; PFAM: Methyltransferase type 11; SPTR: Putative methyltransferase.
  
     0.664
AFZ60725.1
Helix-turn-helix domain protein; PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: vei:Veis_4916 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein.
 
  
 0.589
AFZ58826.1
Hypothetical protein; PFAM: Glycosyl transferase family 8; KEGG: npu:Npun_R2828 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.512
AFZ56521.1
KEGG: ana:all4472 hypothetical protein; SPTR: All4472 protein.
  
     0.467
AFZ59237.1
PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: cpb:Cphamn1_0141 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system.
 
     0.417
cas1
CRISPR-associated protein, Cas1 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
     
 0.402
Your Current Organism:
Anabaena cylindrica
NCBI taxonomy Id: 272123
Other names: A. cylindrica PCC 7122, Anabaena cylindrica IAM M-1, Anabaena cylindrica NIES-19, Anabaena cylindrica PCC 7122, Anabaena cylindrica UTEX B 629, Anabaena sp. ATCC 27899, Anabaena sp. PCC 7122
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.