STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000353285_02892Unannotated protein. (302 aa)    
Predicted Functional Partners:
GCA_000353285_05745
Unannotated protein.
      0.651
GCA_000353285_02893
Unannotated protein.
       0.646
GCA_000353285_02805
Unannotated protein.
 
   
 0.642
GCA_000353285_05933
Unannotated protein.
 
   
 0.593
GCA_000353285_00613
Unannotated protein.
  
   
 0.525
GCA_000353285_01594
Unannotated protein.
 
   
 0.501
GCA_000353285_02664
Unannotated protein.
 
   
 0.492
GCA_000353285_01812
Unannotated protein.
 
   
 0.491
GCA_000353285_00915
Unannotated protein.
 
 
 
 0.485
GCA_000353285_00505
Unannotated protein.
 
 
 
 0.471
Your Current Organism:
Leptolyngbya boryana
NCBI taxonomy Id: 272134
Other names: L. boryana PCC 6306, Leptolyngbya boryana PCC 6306, Leptolyngbya boryana UTEX B 482, Leptolyngbya boryana UTEX B 581, Leptolyngbya sp. ATCC 27894, Leptolyngbya sp. PCC 6306, Plectonema boryanum UTEX B 482, Plectonema boryanum UTEX B 581, Plectonema notatum HMS Z.59.1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.